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Publications (10 of 50) Show all publications
Bouchnita, A., Volpert, V., Koury, M. J. & Hellander, A. (2020). A multiscale model to design therapeutic strategies that overcome drug resistance to tyrosine kinase inhibitors in multiple myeloma. Mathematical Biosciences, 319, Article ID 108293.
Open this publication in new window or tab >>A multiscale model to design therapeutic strategies that overcome drug resistance to tyrosine kinase inhibitors in multiple myeloma
2020 (English)In: Mathematical Biosciences, ISSN 0025-5564, E-ISSN 1879-3134, Vol. 319, article id 108293Article in journal (Refereed) Published
National Category
Bioinformatics (Computational Biology)
Identifiers
urn:nbn:se:uu:diva-406196 (URN)10.1016/j.mbs.2019.108293 (DOI)000508745300004 ()31809782 (PubMedID)
Projects
eSSENCE
Available from: 2019-12-03 Created: 2020-03-06 Last updated: 2020-03-26Bibliographically approved
Bouchnita, A., Hellander, S. & Hellander, A. (2019). A 3D multiscale model to explore the role of EGFR overexpression in tumourigenesis. Bulletin of Mathematical Biology, 81, 2323-2344
Open this publication in new window or tab >>A 3D multiscale model to explore the role of EGFR overexpression in tumourigenesis
2019 (English)In: Bulletin of Mathematical Biology, ISSN 0092-8240, E-ISSN 1522-9602, Vol. 81, p. 2323-2344Article in journal (Refereed) Published
National Category
Bioinformatics (Computational Biology)
Identifiers
urn:nbn:se:uu:diva-382735 (URN)10.1007/s11538-019-00607-y (DOI)000474571900011 ()31016574 (PubMedID)
Projects
eSSENCE
Available from: 2019-04-23 Created: 2019-04-30 Last updated: 2019-09-26Bibliographically approved
Blamey, B., Wrede, F., Karlsson, J., Hellander, A. & Toor, S. (2019). Adapting the secretary hiring problem for optimal hot–cold tier placement under top-K workloads. In: Proc. 19th International Symposium on Cluster, Cloud, and Grid Computing: . Paper presented at CCGRID 2019, May 14–17, Larnaca, Cyprus (pp. 576-583). Los Alamitos, CA: IEEE Computer Society
Open this publication in new window or tab >>Adapting the secretary hiring problem for optimal hot–cold tier placement under top-K workloads
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2019 (English)In: Proc. 19th International Symposium on Cluster, Cloud, and Grid Computing, Los Alamitos, CA: IEEE Computer Society, 2019, p. 576-583Conference paper, Published paper (Refereed)
Place, publisher, year, edition, pages
Los Alamitos, CA: IEEE Computer Society, 2019
National Category
Computer Sciences
Identifiers
urn:nbn:se:uu:diva-393520 (URN)10.1109/CCGRID.2019.00074 (DOI)000483058700065 ()978-1-7281-0912-1 (ISBN)
Conference
CCGRID 2019, May 14–17, Larnaca, Cyprus
Projects
eSSENCE
Available from: 2019-07-04 Created: 2019-09-24 Last updated: 2019-10-14Bibliographically approved
Wrede, F. & Hellander, A. (2019). Smart computational exploration of stochastic gene regulatory network models using human-in-the-loop semi-supervised learning. Bioinformatics, 35, 5199-5206
Open this publication in new window or tab >>Smart computational exploration of stochastic gene regulatory network models using human-in-the-loop semi-supervised learning
2019 (English)In: Bioinformatics, ISSN 1367-4803, E-ISSN 1367-4811, Vol. 35, p. 5199-5206Article in journal (Refereed) Published
National Category
Bioinformatics (Computational Biology)
Identifiers
urn:nbn:se:uu:diva-392179 (URN)10.1093/bioinformatics/btz420 (DOI)000509361200016 ()31141124 (PubMedID)
Projects
eSSENCE
Available from: 2019-05-29 Created: 2019-08-30 Last updated: 2020-03-24Bibliographically approved
Ausmees, K., John, A., Toor, S. Z., Hellander, A. & Nettelblad, C. (2018). BAMSI: a multi-cloud service for scalable distributed filtering of massive genome data. BMC Bioinformatics, 19, 240:1-11, Article ID 240.
Open this publication in new window or tab >>BAMSI: a multi-cloud service for scalable distributed filtering of massive genome data
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2018 (English)In: BMC Bioinformatics, ISSN 1471-2105, E-ISSN 1471-2105, Vol. 19, p. 240:1-11, article id 240Article in journal (Refereed) Published
National Category
Software Engineering Genetics
Identifiers
urn:nbn:se:uu:diva-360033 (URN)10.1186/s12859-018-2241-z (DOI)000436517200001 ()29940842 (PubMedID)
Projects
eSSENCE
Available from: 2018-06-26 Created: 2018-09-09 Last updated: 2019-11-11Bibliographically approved
Torruangwatthana, P., Wieslander, H., Blamey, B., Hellander, A. & Toor, S. (2018). HarmonicIO: Scalable data stream processing for scientific datasets. In: Proc. 11th International Conference on Cloud Computing: . Paper presented at CLOUD 2018, July 2–7, San Francisco, CA (pp. 879-882). Los Alamitos, CA: IEEE Computer Society
Open this publication in new window or tab >>HarmonicIO: Scalable data stream processing for scientific datasets
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2018 (English)In: Proc. 11th International Conference on Cloud Computing, Los Alamitos, CA: IEEE Computer Society, 2018, p. 879-882Conference paper, Published paper (Refereed)
Place, publisher, year, edition, pages
Los Alamitos, CA: IEEE Computer Society, 2018
National Category
Software Engineering
Identifiers
urn:nbn:se:uu:diva-364671 (URN)10.1109/CLOUD.2018.00126 (DOI)000454741700119 ()978-1-5386-7235-8 (ISBN)
Conference
CLOUD 2018, July 2–7, San Francisco, CA
Projects
eSSENCE
Available from: 2018-09-10 Created: 2018-10-31 Last updated: 2019-01-24Bibliographically approved
Singh, P. & Hellander, A. (2018). Hyperparameter optimization for approximate Bayesian computation. In: Proc. 50th Winter Simulation Conference: . Paper presented at WSC 2018, December 9–12, Gothenburg, Sweden (pp. 1718-1729). Piscataway, NJ: IEEE
Open this publication in new window or tab >>Hyperparameter optimization for approximate Bayesian computation
2018 (English)In: Proc. 50th Winter Simulation Conference, Piscataway, NJ: IEEE, 2018, p. 1718-1729Conference paper, Published paper (Refereed)
Place, publisher, year, edition, pages
Piscataway, NJ: IEEE, 2018
National Category
Computational Mathematics
Identifiers
urn:nbn:se:uu:diva-373961 (URN)10.1109/WSC.2018.8632304 (DOI)000461414101078 ()978-1-5386-6572-5 (ISBN)
Conference
WSC 2018, December 9–12, Gothenburg, Sweden
Projects
eSSENCE
Available from: 2019-02-04 Created: 2019-01-17 Last updated: 2019-05-02Bibliographically approved
Singh, P. & Hellander, A. (2018). Multi-objective optimization driven construction of uniform priors for likelihood-free parameter inference. In: Proc. 32nd European Simulation and Modelling Conference: . Paper presented at ESM 2018, October 24–26, Ghent, Belgium (pp. 22-27). EUROSIS
Open this publication in new window or tab >>Multi-objective optimization driven construction of uniform priors for likelihood-free parameter inference
2018 (English)In: Proc. 32nd European Simulation and Modelling Conference, EUROSIS , 2018, p. 22-27Conference paper, Published paper (Refereed)
Place, publisher, year, edition, pages
EUROSIS, 2018
National Category
Computational Mathematics Computer Sciences
Identifiers
urn:nbn:se:uu:diva-373959 (URN)978-94-92859-05-1 (ISBN)
Conference
ESM 2018, October 24–26, Ghent, Belgium
Projects
eSSENCE
Available from: 2018-10-26 Created: 2019-01-17 Last updated: 2019-01-18Bibliographically approved
Coulier, A. & Hellander, A. (2018). Orchestral: a lightweight framework for parallel simulations of cell–cell communication. In: Proc. 14th International Conference on e-Science: . Paper presented at e-Science 2018, October 29 – November 1, Amsterdam, The Netherlands (pp. 168-176). Los Alamitos, CA: IEEE Computer Society
Open this publication in new window or tab >>Orchestral: a lightweight framework for parallel simulations of cell–cell communication
2018 (English)In: Proc. 14th International Conference on e-Science, Los Alamitos, CA: IEEE Computer Society, 2018, p. 168-176Conference paper, Published paper (Refereed)
Place, publisher, year, edition, pages
Los Alamitos, CA: IEEE Computer Society, 2018
National Category
Software Engineering
Identifiers
urn:nbn:se:uu:diva-379431 (URN)10.1109/eScience.2018.00032 (DOI)000459856400024 ()978-1-5386-9156-4 (ISBN)
Conference
e-Science 2018, October 29 – November 1, Amsterdam, The Netherlands
Projects
eSSENCE
Available from: 2018-12-27 Created: 2019-03-18 Last updated: 2019-03-28Bibliographically approved
Jallow, A., Hellander, A. & Toor, S. (2017). Cost-aware application development and management using CLOUD-METRIC. In: Proc. 7th International Conference on Cloud Computing and Services Science: . Paper presented at CLOSER 2017 (pp. 515-522). Setúbal, Portugal: SciTePress
Open this publication in new window or tab >>Cost-aware application development and management using CLOUD-METRIC
2017 (English)In: Proc. 7th International Conference on Cloud Computing and Services Science, Setúbal, Portugal: SciTePress, 2017, p. 515-522Conference paper, Published paper (Refereed)
Place, publisher, year, edition, pages
Setúbal, Portugal: SciTePress, 2017
National Category
Software Engineering
Identifiers
urn:nbn:se:uu:diva-326539 (URN)10.5220/0006307505150522 (DOI)000465221900050 ()978-989-758-243-1 (ISBN)
Conference
CLOSER 2017
Projects
eSSENCE
Available from: 2017-04-29 Created: 2017-07-13 Last updated: 2019-08-29Bibliographically approved
Organisations
Identifiers
ORCID iD: ORCID iD iconorcid.org/0000-0001-7273-7923

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