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Publications (10 of 32) Show all publications
Liu, J., Engblom, S. & Nettelblad, C. (2018). Assessing uncertainties in x-ray single-particle three-dimensional reconstruction. Physical Review E. Statistical, Nonlinear, and Soft Matter Physics, 98, 013303:1-12, Article ID 013303.
Open this publication in new window or tab >>Assessing uncertainties in x-ray single-particle three-dimensional reconstruction
2018 (English)In: Physical Review E. Statistical, Nonlinear, and Soft Matter Physics, ISSN 1539-3755, E-ISSN 1550-2376, Vol. 98, p. 013303:1-12, article id 013303Article in journal (Refereed) Published
National Category
Computer Sciences Biophysics
Identifiers
urn:nbn:se:uu:diva-355899 (URN)10.1103/PhysRevE.98.013303 (DOI)
Projects
UPMARCeSSENCE
Available from: 2018-07-05 Created: 2018-07-07 Last updated: 2018-09-27Bibliographically approved
Ausmees, K., John, A., Toor, S. Z., Hellander, A. & Nettelblad, C. (2018). BAMSI: a multi-cloud service for scalable distributed filtering of massive genome data. BMC Bioinformatics, 19, 240:1-11, Article ID 240.
Open this publication in new window or tab >>BAMSI: a multi-cloud service for scalable distributed filtering of massive genome data
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2018 (English)In: BMC Bioinformatics, ISSN 1471-2105, E-ISSN 1471-2105, Vol. 19, p. 240:1-11, article id 240Article in journal (Refereed) Published
National Category
Software Engineering Genetics
Identifiers
urn:nbn:se:uu:diva-360033 (URN)10.1186/s12859-018-2241-z (DOI)
Projects
eSSENCE
Available from: 2018-06-26 Created: 2018-09-09 Last updated: 2018-09-13Bibliographically approved
Lundholm, I. V., Sellberg, J. A., Ekeberg, T., Hantke, M. F., Okamoto, K., van der Schot, G., . . . Maia, F. R. N. (2018). Considerations for three-dimensional image reconstruction from experimental data in coherent diffractive imaging. IUCrJ, 5, 531-541
Open this publication in new window or tab >>Considerations for three-dimensional image reconstruction from experimental data in coherent diffractive imaging
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2018 (English)In: IUCrJ, ISSN 0972-6918, E-ISSN 2052-2525, Vol. 5, p. 531-541Article in journal (Refereed) Published
National Category
Biophysics
Identifiers
urn:nbn:se:uu:diva-360034 (URN)10.1107/S2052252518010047 (DOI)
Projects
eSSENCE
Available from: 2018-09-01 Created: 2018-09-09 Last updated: 2018-09-13Bibliographically approved
Gorkhover, T., Ulmer, A., Ferguson, K., Bucher, M., Maia, F. R. N., Bielecki, J., . . . Bostedt, C. (2018). Femtosecond X-ray Fourier holography imaging of free-flying nanoparticles [Letter to the editor]. Nature Photonics, 12, 150-153
Open this publication in new window or tab >>Femtosecond X-ray Fourier holography imaging of free-flying nanoparticles
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2018 (English)In: Nature Photonics, ISSN 1749-4885, E-ISSN 1749-4893, Vol. 12, p. 150-153Article in journal, Letter (Refereed) Published
National Category
Biophysics
Identifiers
urn:nbn:se:uu:diva-345590 (URN)10.1038/s41566-018-0110-y (DOI)000426153800014 ()
Projects
eSSENCE
Available from: 2018-02-26 Created: 2018-03-09 Last updated: 2018-09-13Bibliographically approved
Pietrini, A. & Nettelblad, C. (2018). Using convex optimization of autocorrelation with constrained support and windowing for improved phase retrieval accuracy. Optics Express, 26, 24422-24443
Open this publication in new window or tab >>Using convex optimization of autocorrelation with constrained support and windowing for improved phase retrieval accuracy
2018 (English)In: Optics Express, ISSN 1094-4087, E-ISSN 1094-4087, Vol. 26, p. 24422-24443Article in journal (Refereed) Published
National Category
Computational Mathematics Biophysics
Identifiers
urn:nbn:se:uu:diva-360037 (URN)10.1364/OE.26.024422 (DOI)
Projects
eSSENCE
Available from: 2018-09-05 Created: 2018-09-09 Last updated: 2018-09-09Bibliographically approved
Mahjani, B., Toor, S., Nettelblad, C. & Holmgren, S. (2017). A flexible computational framework using R and Map-Reduce for permutation tests of massive genetic analysis of complex traits. IEEE/ACM Transactions on Computational Biology & Bioinformatics, 14, 381-392
Open this publication in new window or tab >>A flexible computational framework using R and Map-Reduce for permutation tests of massive genetic analysis of complex traits
2017 (English)In: IEEE/ACM Transactions on Computational Biology & Bioinformatics, ISSN 1545-5963, E-ISSN 1557-9964, Vol. 14, p. 381-392Article in journal (Refereed) Published
National Category
Computational Mathematics Bioinformatics and Systems Biology
Identifiers
urn:nbn:se:uu:diva-284372 (URN)10.1109/TCBB.2016.2527639 (DOI)000399013500017 ()26887003 (PubMedID)
Projects
eSSENCE
Available from: 2016-02-11 Created: 2016-04-18 Last updated: 2018-09-18Bibliographically approved
Antolín, R., Nettelblad, C., Gorjanc, G., Money, D. & Hickey, J. M. (2017). A hybrid method for the imputation of genomic data in livestock populations. Genetics Selection Evolution, 49, Article ID 30.
Open this publication in new window or tab >>A hybrid method for the imputation of genomic data in livestock populations
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2017 (English)In: Genetics Selection Evolution, ISSN 0999-193X, E-ISSN 1297-9686, Vol. 49, article id 30Article in journal (Refereed) Published
National Category
Genetics Computational Mathematics
Identifiers
urn:nbn:se:uu:diva-320664 (URN)10.1186/s12711-017-0300-y (DOI)000396076700001 ()28253858 (PubMedID)
Projects
eSSENCE
Available from: 2017-03-03 Created: 2017-06-07 Last updated: 2017-06-10Bibliographically approved
Pietrini, A. & Nettelblad, C. (2017). Artifact reduction in the CSPAD detectors used for LCLS experiments. Journal of Synchrotron Radiation, 24, 1092-1097
Open this publication in new window or tab >>Artifact reduction in the CSPAD detectors used for LCLS experiments
2017 (English)In: Journal of Synchrotron Radiation, ISSN 0909-0495, E-ISSN 1600-5775, Vol. 24, p. 1092-1097Article in journal (Refereed) Published
National Category
Biophysics
Identifiers
urn:nbn:se:uu:diva-328543 (URN)10.1107/S160057751701058X (DOI)000408902800025 ()28862634 (PubMedID)
Projects
eSSENCE
Available from: 2017-07-18 Created: 2017-08-25 Last updated: 2017-12-13Bibliographically approved
Reddy, H. K. N., Yoon, C. H., Aquila, A., Awel, S., Ayyer, K., Barty, A., . . . Xavier Paulraj, L. (2017). Coherent soft X-ray diffraction imaging of Coliphage PR772 at the Linac coherent light source. Scientific Data, 4, Article ID 170079.
Open this publication in new window or tab >>Coherent soft X-ray diffraction imaging of Coliphage PR772 at the Linac coherent light source
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2017 (English)In: Scientific Data, E-ISSN 2052-4463, Vol. 4, article id 170079Article in journal (Refereed) Published
National Category
Biophysics
Identifiers
urn:nbn:se:uu:diva-328536 (URN)10.1038/sdata.2017.79 (DOI)000404232100001 ()28654088 (PubMedID)
Projects
eSSENCE
Available from: 2017-06-27 Created: 2017-08-25 Last updated: 2018-04-26Bibliographically approved
Kurta, R. P., Donatelli, J. J., Yoon, C. H., Berntsen, P., Bielecki, J., Daurer, B. J., . . . Mancuso, A. P. (2017). Correlations in scattered X-ray laser pulses reveal nanoscale structural features of viruses. Physical Review Letters, 119(15), 158102:1-7, Article ID 158102.
Open this publication in new window or tab >>Correlations in scattered X-ray laser pulses reveal nanoscale structural features of viruses
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2017 (English)In: Physical Review Letters, ISSN 0031-9007, E-ISSN 1079-7114, Vol. 119, no 15, p. 158102:1-7, article id 158102Article in journal (Refereed) Published
National Category
Biophysics
Identifiers
urn:nbn:se:uu:diva-331406 (URN)10.1103/PhysRevLett.119.158102 (DOI)000412840600011 ()
Projects
eSSENCE
Available from: 2017-10-12 Created: 2017-10-13 Last updated: 2018-01-16Bibliographically approved
Organisations
Identifiers
ORCID iD: ORCID iD iconorcid.org/0000-0003-0458-6902

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