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Publications (10 of 30) Show all publications
Liu, J., Engblom, S. & Nettelblad, C. (2018). Assessing uncertainties in x-ray single-particle three-dimensional reconstruction. Physical Review E. Statistical, Nonlinear, and Soft Matter Physics, 98, 013303:1-12, Article ID 013303.
Open this publication in new window or tab >>Assessing uncertainties in x-ray single-particle three-dimensional reconstruction
2018 (English)In: Physical Review E. Statistical, Nonlinear, and Soft Matter Physics, ISSN 1539-3755, E-ISSN 1550-2376, Vol. 98, p. 013303:1-12, article id 013303Article in journal (Refereed) Published
National Category
Computer Sciences Biophysics
Identifiers
urn:nbn:se:uu:diva-355899 (URN)10.1103/PhysRevE.98.013303 (DOI)
Projects
UPMARCeSSENCE
Available from: 2018-07-05 Created: 2018-07-07 Last updated: 2018-07-07Bibliographically approved
Gorkhover, T., Ulmer, A., Ferguson, K., Bucher, M., Maia, F. R. .., Bielecki, J., . . . Bostedt, C. (2018). Femtosecond X-ray Fourier holography imaging of free-flying nanoparticles. Nature Photonics, 12(3), 150-153
Open this publication in new window or tab >>Femtosecond X-ray Fourier holography imaging of free-flying nanoparticles
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2018 (English)In: Nature Photonics, ISSN 1749-4885, E-ISSN 1749-4893, Vol. 12, no 3, p. 150-153Article in journal (Refereed) Published
Abstract [en]

Ultrafast X-ray imaging on individual fragile specimens such as aerosols 1 , metastable particles 2 , superfluid quantum systems 3 and live biospecimens 4 provides high-resolution information that is inaccessible with conventional imaging techniques. Coherent X-ray diffractive imaging, however, suffers from intrinsic loss of phase, and therefore structure recovery is often complicated and not always uniquely defined4,5. Here, we introduce the method of in-flight holography, where we use nanoclusters as reference X-ray scatterers to encode relative phase information into diffraction patterns of a virus. The resulting hologram contains an unambiguous three-dimensional map of a virus and two nanoclusters with the highest lateral resolution so far achieved via single shot X-ray holography. Our approach unlocks the benefits of holography for ultrafast X-ray imaging of nanoscale, non-periodic systems and paves the way to direct observation of complex electron dynamics down to the attosecond timescale.

National Category
Atom and Molecular Physics and Optics
Identifiers
urn:nbn:se:uu:diva-345590 (URN)10.1038/s41566-018-0110-y (DOI)000426153800014 ()
Funder
German Research Foundation (DFG), BO3169/2-2European Regional Development Fund (ERDF), CZ.02.1.01/0.0/0.0/15European Regional Development Fund (ERDF), 003/0000447
Available from: 2018-03-09 Created: 2018-03-09 Last updated: 2018-05-04Bibliographically approved
Mahjani, B., Toor, S., Nettelblad, C. & Holmgren, S. (2017). A flexible computational framework using R and Map-Reduce for permutation tests of massive genetic analysis of complex traits. IEEE/ACM Transactions on Computational Biology & Bioinformatics, 14, 381-392
Open this publication in new window or tab >>A flexible computational framework using R and Map-Reduce for permutation tests of massive genetic analysis of complex traits
2017 (English)In: IEEE/ACM Transactions on Computational Biology & Bioinformatics, ISSN 1545-5963, E-ISSN 1557-9964, Vol. 14, p. 381-392Article in journal (Refereed) Published
National Category
Computational Mathematics Bioinformatics and Systems Biology
Identifiers
urn:nbn:se:uu:diva-284372 (URN)10.1109/TCBB.2016.2527639 (DOI)
Projects
eSSENCE
Available from: 2016-02-11 Created: 2016-04-18 Last updated: 2017-11-30Bibliographically approved
Antolín, R., Nettelblad, C., Gorjanc, G., Money, D. & Hickey, J. M. (2017). A hybrid method for the imputation of genomic data in livestock populations. Genetics Selection Evolution, 49, Article ID 30.
Open this publication in new window or tab >>A hybrid method for the imputation of genomic data in livestock populations
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2017 (English)In: Genetics Selection Evolution, ISSN 0999-193X, E-ISSN 1297-9686, Vol. 49, article id 30Article in journal (Refereed) Published
National Category
Genetics Computational Mathematics
Identifiers
urn:nbn:se:uu:diva-320664 (URN)10.1186/s12711-017-0300-y (DOI)000396076700001 ()28253858 (PubMedID)
Projects
eSSENCE
Available from: 2017-03-03 Created: 2017-06-07 Last updated: 2017-06-10Bibliographically approved
Pietrini, A. & Nettelblad, C. (2017). Artifact reduction in the CSPAD detectors used for LCLS experiments. Journal of Synchrotron Radiation, 24, 1092-1097
Open this publication in new window or tab >>Artifact reduction in the CSPAD detectors used for LCLS experiments
2017 (English)In: Journal of Synchrotron Radiation, ISSN 0909-0495, E-ISSN 1600-5775, Vol. 24, p. 1092-1097Article in journal (Refereed) Published
National Category
Biophysics
Identifiers
urn:nbn:se:uu:diva-328543 (URN)10.1107/S160057751701058X (DOI)000408902800025 ()28862634 (PubMedID)
Projects
eSSENCE
Available from: 2017-07-18 Created: 2017-08-25 Last updated: 2017-12-13Bibliographically approved
Reddy, H. K. N., Yoon, C. H., Aquila, A., Awel, S., Ayyer, K., Barty, A., . . . Xavier Paulraj, L. (2017). Coherent soft X-ray diffraction imaging of Coliphage PR772 at the Linac coherent light source. Scientific Data, 4, Article ID 170079.
Open this publication in new window or tab >>Coherent soft X-ray diffraction imaging of Coliphage PR772 at the Linac coherent light source
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2017 (English)In: Scientific Data, E-ISSN 2052-4463, Vol. 4, article id 170079Article in journal (Refereed) Published
National Category
Biophysics
Identifiers
urn:nbn:se:uu:diva-328536 (URN)10.1038/sdata.2017.79 (DOI)000404232100001 ()28654088 (PubMedID)
Projects
eSSENCE
Available from: 2017-06-27 Created: 2017-08-25 Last updated: 2018-04-26Bibliographically approved
Kurta, R. P., Donatelli, J. J., Yoon, C. H., Berntsen, P., Bielecki, J., Daurer, B. J., . . . Mancuso, A. P. (2017). Correlations in scattered X-ray laser pulses reveal nanoscale structural features of viruses. Physical Review Letters, 119(15), 158102:1-7, Article ID 158102.
Open this publication in new window or tab >>Correlations in scattered X-ray laser pulses reveal nanoscale structural features of viruses
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2017 (English)In: Physical Review Letters, ISSN 0031-9007, E-ISSN 1079-7114, Vol. 119, no 15, p. 158102:1-7, article id 158102Article in journal (Refereed) Published
National Category
Biophysics
Identifiers
urn:nbn:se:uu:diva-331406 (URN)10.1103/PhysRevLett.119.158102 (DOI)000412840600011 ()
Projects
eSSENCE
Available from: 2017-10-12 Created: 2017-10-13 Last updated: 2018-01-16Bibliographically approved
Daurer, B. J., Okamoto, K., Bielecki, J., Maia, F. R. N., Mühlig, K., Seibert, M. M., . . . Larsson, D. S. D. (2017). Experimental strategies for imaging bioparticles with femtosecond hard X-ray pulses. IUCrJ, 4, 251-262
Open this publication in new window or tab >>Experimental strategies for imaging bioparticles with femtosecond hard X-ray pulses
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2017 (English)In: IUCrJ, ISSN 0972-6918, E-ISSN 2052-2525, Vol. 4, p. 251-262Article in journal (Refereed) Published
National Category
Biophysics
Identifiers
urn:nbn:se:uu:diva-323439 (URN)10.1107/S2052252517003591 (DOI)000400460500008 ()28512572 (PubMedID)
Projects
eSSENCE
Available from: 2017-04-07 Created: 2017-11-14 Last updated: 2018-04-26Bibliographically approved
Robledo, D., Fernandez, C., Hermida, M., Sciara, A., Arranz, S. E., Alvarez-Dios, J. A., . . . Bouza, C. (2017). Integration Of Genomic, RNAseq And QTL Resources Identifies Variation In Candidate Genes For Growth In Turbot (Scophthalmus Maximus L.). Paper presented at 12th International Symposium on Genetics in Aquaculture (ISGA), JUN 21-27, 2015, Santiago de Compostela, SPAIN. Aquaculture, 472, 163-163
Open this publication in new window or tab >>Integration Of Genomic, RNAseq And QTL Resources Identifies Variation In Candidate Genes For Growth In Turbot (Scophthalmus Maximus L.)
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2017 (English)In: Aquaculture, ISSN 0044-8486, E-ISSN 1873-5622, Vol. 472, p. 163-163Article in journal, Meeting abstract (Other academic) Published
Keywords
turbot, RNAseq, QTL, SNP, growth-related genes
National Category
Fish and Aquacultural Science
Identifiers
urn:nbn:se:uu:diva-346560 (URN)000411454500231 ()
Conference
12th International Symposium on Genetics in Aquaculture (ISGA), JUN 21-27, 2015, Santiago de Compostela, SPAIN
Available from: 2018-03-21 Created: 2018-03-21 Last updated: 2018-03-21Bibliographically approved
Munke, A., Andreasson, J., Aquila, A., Awel, S., Ayyer, K., Barty, A., . . . Zook, J. (2016). Coherent diffraction of single Rice Dwarf virus particles using hard X-rays at the Linac Coherent Light Source. Scientific Data, 3, 160064:1-12, Article ID 160064.
Open this publication in new window or tab >>Coherent diffraction of single Rice Dwarf virus particles using hard X-rays at the Linac Coherent Light Source
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2016 (English)In: Scientific Data, E-ISSN 2052-4463, Vol. 3, p. 160064:1-12, article id 160064Article in journal (Refereed) Published
National Category
Biophysics
Identifiers
urn:nbn:se:uu:diva-300203 (URN)10.1038/sdata.2016.64 (DOI)000390225700001 ()
Projects
eSSENCE
Available from: 2016-08-01 Created: 2016-08-05 Last updated: 2017-11-28Bibliographically approved
Organisations
Identifiers
ORCID iD: ORCID iD iconorcid.org/0000-0003-0458-6902

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