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Software for handling macromolecular envelopes
Uppsala University, Teknisk-naturvetenskapliga vetenskapsområdet, Faculty of Science and Technology, Biology, Department of Cell and Molecular Biology. Uppsala University, Teknisk-naturvetenskapliga vetenskapsområdet, Faculty of Science and Technology, Biology, Department of Cell and Molecular Biology, Structural Molecular Biology.
Uppsala University, Teknisk-naturvetenskapliga vetenskapsområdet, Faculty of Science and Technology, Biology, Department of Cell and Molecular Biology. Uppsala University, Teknisk-naturvetenskapliga vetenskapsområdet, Faculty of Science and Technology, Biology, Department of Cell and Molecular Biology, Structural Molecular Biology.
1999 (English)In: ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, ISSN 0907-4449, Vol. 55, 941-944 p.Article in journal (Refereed) Published
Abstract [en]

Macromolecular phase-refinement and phase-extension calculations using real-space electron-density averaging techniques require accurate envelopes (or masks) to define the boundaries of each domain or molecule whose density is to be averaged. An extensive set of tools, implemented in four computer programs (O, MAMA, COMA and MASKIT) are described which can be used to generate such envelopes (either from an atomic model or based on local density-correlation maps), to improve them, to remove overlap owing to crystallographic or non-crystallographic symmetry, to display them and to manipulate them in a variety of manners.

Place, publisher, year, edition, pages
1999. Vol. 55, 941-944 p.
Keyword [en]
ELECTRON-DENSITY MAPS; CANDIDA-ANTARCTICA; CRYSTAL-STRUCTURE; LIPASE-B; PROTEIN; REFINEMENT; SYMMETRY; PROGRAMS
Identifiers
URN: urn:nbn:se:uu:diva-78689OAI: oai:DiVA.org:uu-78689DiVA: diva2:106602
Available from: 2006-12-15 Created: 2006-12-15 Last updated: 2011-01-14

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