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Author:
Zhang, Jing (Uppsala University, Department of Biochemistry)
Title:
Biochemical Study and Technical Applications of Fungal Pectinase
Department:
Uppsala University, Teknisk-naturvetenskapliga vetenskapsområdet, Chemistry, Department of Biochemistry
Publication type:
Doctoral thesis, comprehensive summary (Other academic)
Language:
English
Place of publ.:
Uppsala
Publisher:
Acta Universitatis Upsaliensis
Pages:
47
Series:
Digital Comprehensive Summaries of Uppsala Dissertations from the Faculty of Science and Technology, ISSN 1651-6214; 137
Year of publ.:
2006
URI:
urn:nbn:se:uu:diva-6295
Permanent link:
http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-6295
ISBN:
91-554-6441-6
Subject category:
Biochemistry
Keywords(en) :
Biochemistry, Pectin, pectinase, polygalacturonan, polygalacturonase, retting, flax, enzymatic retting, pre-incubation, discoloration, pulping
Keywords(sv) :
Biokemi
Abstract(en) :

Pectinases are a group of enzymes produced by bacteria, fungi, higher plants and animals. Pectinases can modify and degrade pectins, a class of heterogeneous and multifunctional polysaccharides present in middle lamellae and primary cell walls of plants. Pectins have been showed to play diverse roles in cell physiology, growth, adhesion and separation. Pectinases are used technically in the processing of fiber production and fruit juice or wine making. We have studied the mechanisms and applications of pectinases, especially in retting, a microbiological process where bast fibers in flax and other bast fiber cultivars are released from each other and from the woody core.

A strong correlation was found between the ability to perform retting and the degradation of sparsely esterified pectin, a substrate of polygalacturonase. This led to the conclusion that polygalacturonase plays a key role in the enzymatic retting of flax. We purified and characterized an extracellular polygalacturonase produced by Rhizopus oryzae, a very potent retting organism. The purified enzyme which appeared to be the single active component in retting, has non-methylated polygalacturonan as its preferred substrate. Peptide sequences indicate that the enzyme, like another polygalacturonase (EC. 3.2.1.15), belongs to glycosyl hydrolase family 28. It contains, however, an N-terminal sequence absent from other fungal pectinases, but present in an enzyme from the phytopathogenic bacterium, Ralstonia solanacearum.

Our finding that removal of calcium ions from the plant material by pre-incubation in dilute acid in enzymatic retting could reduce enzyme consumption by several orders of magnitude, improves the economical feasibility of the enzymatic retting process. Comparisons with different acids showed that the action was mainly pH dependent.

Pectinases were employed as analytical tools in a study of stored wood discoloration and, together with cellulases, in a mechanical process for making pulp from flax and hemp in paper production.

Public defence:
2006-02-03, Room B22, BMC, Husargatan 3, Uppsala, 10:30
Degree:
degree of Doctor of Philosophy
Supervisor:
Johansson, Gunnar, Universitetslektor
Henriksson, Gunnar, Universitetslektor
Opponent:
Hafrén, Jonas, Docent (Wood Science, Uppsala)
Available from:
2006-01-12
Created:
2007-09-13
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