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A proof-of-concept study on mortality prediction with machine learning algorithms using burn intensive care data
Uppsala University, Disciplinary Domain of Medicine and Pharmacy, Faculty of Medicine, Department of Surgical Sciences, Plastic Surgery.ORCID iD: 0000-0003-0503-8019
Karolinska Institute Department of Global Public Health, Stockholm, Sweden;FIMM, Institute for Molecular Medicine, Helsinki, Finland.
Uppsala University, Disciplinary Domain of Medicine and Pharmacy, Faculty of Medicine, Department of Surgical Sciences, Anaesthesiology and Intensive Care.
Uppsala University, Disciplinary Domain of Medicine and Pharmacy, Faculty of Medicine, Department of Surgical Sciences, Plastic Surgery.ORCID iD: 0000-0002-9735-1434
2022 (English)In: Scars, Burns & Healing, ISSN 2059-5131Article in journal (Refereed) Epub ahead of print
Abstract [en]

Introduction

Burn injuries are a common traumatic injury. Large burns have high mortality requiring intensive care and accurate mortality predictions. To assess if machine learning (ML) could improve predictions, ML algorithms were tested and compared with the original and revised Baux score.

Methods

Admission data and mortality outcomes were collected from patients at Uppsala University Hospital Burn Centre from 2002 to 2019. Prognostic variables were selected, ML algorithms trained and predictions assessed by analysis of the area under the receiver operating characteristic curve (AUC). Comparison was made with Baux scores using DeLong test.

Results

A total of 17 prognostic variables were selected from 92 patients. AUCs in leave-one-out cross-validation for a decision tree model, an extreme boosting model, a random forest model, a support-vector machine (SVM) model and a generalised linear regression model (GLM) were 0.83 (95% confidence interval [CI] = 0.72–0.94), 0.92 (95% CI = 0.84–1), 0.92 (95% CI = 0.84–1), 0.92 (95% CI = 0.84–1) and 0.84 (95% CI = 0.74–0.94), respectively. AUCs for the Baux score and revised Baux score were 0.85 (95% CI = 0.75–0.95) and 0.84 (95% CI = 0.74–0.94). No significant differences were observed when comparing ML algorithms with Baux score and revised Baux score. Secondary variable selection was made to analyse model performance.

Conclusion

This proof-of-concept study showed initial credibility in using ML algorithms to predict mortality in burn patients. The sample size was small and future studies are needed with larger sample sizes, further variable selections and prospective testing of the algorithms.

Place, publisher, year, edition, pages
Sage Publications, 2022.
National Category
Anesthesiology and Intensive Care
Identifiers
URN: urn:nbn:se:uu:diva-490045DOI: 10.1177/20595131211066585PubMedID: 35198237OAI: oai:DiVA.org:uu-490045DiVA, id: diva2:1716960
Available from: 2022-12-07 Created: 2022-12-07 Last updated: 2024-05-22
In thesis
1. Large data and machine learning in analysis, diagnostics, and clinical decision making: applications in the treatment of burn injury
Open this publication in new window or tab >>Large data and machine learning in analysis, diagnostics, and clinical decision making: applications in the treatment of burn injury
2023 (English)Doctoral thesis, comprehensive summary (Other academic)
Abstract [en]

Burn injury is a common trauma globally. Large burns require fluid resuscitation, infection control, and specialized intensive care. The size of the burn and infections caused by resistant microbes are correlated to mortality, and accurate mortality predictions are important. Errors are common when diagnosing burn depth, but early diagnosis is necessary to make correct surgical decisions. Machine learning (ML) is a set of mathematical algorithms with self-learning capabilities, which might make them suitable for medical applications.

This thesis explores systematic large data analysis and ML algorithms for clinical applications in burn treatment by examining antibiotic resistance, improving mortality predictions, and automating diagnosis of burn depth.

Paper I aims to find relevant trends and correlations on clinical outcomes such as mortality, microbial distribution, and antibiotic resistance from pooled data from a burn center. Data from 1570 patients and 15,006 microbiology cultures were systematically analyzed. Our results show a sustained low risk of harmful microbes, resistance, and a suggested low mortality rate.

Paper II used clinical biomarkers from burn patients to train ML algorithms to predict mortality and compare it with Baux scores. When applying five types of ML algorithms, it showed no significant difference in mortality prediction compared with Baux scores.

Paper III examines convolutional neural network (CNN) algorithms for two purposes. One to segment a burn wound and the other to classify whole wound images for surgery or conservative treatment. A total of 1105 diverse images were collected from patients at admission to burn centers in Sweden and South Africa. The algorithm was adequate for segmenting burn wounds and could be improved when categorizing images for surgery or conservative treatment.

Paper IV further assesses CNN to automatically segment and diagnose a diverse set of early burn images for deep or superficial burn injury. A total of 1004 images were included. The algorithm proved adequate in segmenting superficial injuries but not deep injuries and performed similarly between darker and lighter skin patients.

Future studies might incorporate infection variables in ML mortality predictions and larger sample sizes. Regarding automated burn image diagnosis, including multiple non-image variables might improve usability.

Place, publisher, year, edition, pages
Uppsala: Acta Universitatis Upsaliensis, 2023. p. 55
Series
Digital Comprehensive Summaries of Uppsala Dissertations from the Faculty of Medicine, ISSN 1651-6206 ; 1983
Keywords
Burn wound infection; Antibiotic susceptibility; Burn mortality; Machine learning; Burns; Burn assessment; Convolutional neural network; Artificial intelligence; Intensive care;
National Category
Clinical Medicine
Research subject
Plastic Surgery; Surgery; Machine learning
Identifiers
urn:nbn:se:uu:diva-513553 (URN)978-91-513-1924-7 (ISBN)
Public defence
2023-11-28, Fåhraeussalen, Rudbecklaboratoriet, ingång C5, Dag Hammarskjölds väg 20, Uppsala, 12:00 (English)
Opponent
Supervisors
Available from: 2023-11-06 Created: 2023-10-09 Last updated: 2023-11-09

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Fransén, JianFredén, FilipHuss, Fredrik

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