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Horizontal gene transfer in eukaryotic parasites: a case study of Entamoeba histolytica and Trichomonas vaginalis
Institute for Cell and Molecular Biosciences, Newcastle University, Newcastle upon Tyne, UK.
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2009 (English)In: Horizontal Gene Transfer: Methods in Flux / [ed] Maria Boekels Gogarten, Johann Peter Gogarten and Lorraine Olendzenski, Humana Press , 2009, Vol. 532, 489-500 p.Chapter in book (Other academic)
Abstract [en]

Over the past few years it has become apparent that horizontal gene transfer (HGT) has played an important role in the evolution of pathogenic prokaryotes. What is less clear is the exact role that HGT has played in shaping the metabolism of eukaryotic organisms. The main problems are the reliable inference of HGT on a genomic scale as well as the functional assignment of genes in these poorly studied organisms. We have screened the completed genomes of the protists Entamoeba histolytica and Trichomonas vaginalis for cases of HGT from prokaryotes. Using a fast primary screen followed by a conservative phylogenetic approach, we found 68 and 153 recent cases of HGT in the respective organisms. The majority of transferred genes that fall into functional categories code for enzymes involved in metabolism. We found a broad range of prokaryotic lineages represented among the donors, but organisms that share similar environmental niches with E. histolytica and T. vaginalis, such as the gut and the vaginal mucosa, dominate.

Place, publisher, year, edition, pages
Humana Press , 2009. Vol. 532, 489-500 p.
Series
Methods In Molecular Biology, ISSN 1064-3745 ; 532
National Category
Pharmaceutical Sciences
Research subject
Pharmacognosy
Identifiers
URN: urn:nbn:se:uu:diva-125098DOI: 10.1007/978-1-60327-853-9_28PubMedID: 19271203ISBN: 978-1-60327-852-2 (print)ISBN: 978-1-60327-853-9 (print)OAI: oai:DiVA.org:uu-125098DiVA: diva2:318374
Available from: 2010-05-07 Created: 2010-05-07 Last updated: 2010-07-19Bibliographically approved

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Alsmark, U. Cecilia

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CiteExportLink to record
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Citation style
  • apa
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