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Is there a justification for differential a priori weighting in coding sequences? A case study from rbcL and Apocynaceae s.l.
Uppsala University, Teknisk-naturvetenskapliga vetenskapsområdet, Faculty of Science and Technology, Biology, Department of Evolutionary Biology.
2000 (English)In: SYSTEMATIC BIOLOGY, ISSN 1063-5157, Vol. 49, no 1, 101-113 p.Article in journal (Refereed) Published
Abstract [en]

Functional constraints are often assumed to influence the performance of nucleotide characters in phylogenetic analysis: First and second codon positions and sites of structural importance are considered to show less homoplasy. We investigate the performa

Place, publisher, year, edition, pages
TAYLOR & FRANCIS LTD , 2000. Vol. 49, no 1, 101-113 p.
Keyword [en]
Apocynaceae s.l.; character performance; character weighting; codon constraints; functional constraints; protein structure; rescaled consistency index; PHYLOGENETIC ANALYSIS; EVOLUTIONARY TREES; DNA-SEQUENCES; ACTIVE-SITE; GENE; ASCLEPIADACEAE; CONFIDENCE
Identifiers
URN: urn:nbn:se:uu:diva-38168OAI: oai:DiVA.org:uu-38168DiVA: diva2:66067
Note
Addresses: Sennblad B, Uppsala Univ, Dept Systemat Bot, Evolutionary Biol Ctr, Norbyv 18D, S-75236 Uppsala, Sweden. Uppsala Univ, Dept Systemat Bot, Evolutionary Biol Ctr, S-75236 Uppsala, Sweden.Available from: 2008-10-17 Created: 2008-10-17 Last updated: 2011-01-14

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