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Single-cell transcriptional pharmacodynamics of trifluridine in a tumor-immune model
Uppsala University, Disciplinary Domain of Medicine and Pharmacy, Faculty of Medicine, Department of Medical Sciences, Cancer Pharmacology and Computational Medicine.
Stockholm Univ, Natl Bioinformat Infrastruct Sweden NBIS, Stockholm, Sweden..
Uppsala University, Disciplinary Domain of Medicine and Pharmacy, Faculty of Medicine, Department of Medical Sciences, Cancer Pharmacology and Computational Medicine. Uppsala University, Science for Life Laboratory, SciLifeLab.
Uppsala University, Disciplinary Domain of Medicine and Pharmacy, Faculty of Medicine, Department of Medical Sciences, Cancer Pharmacology and Computational Medicine.
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2022 (English)In: Scientific Reports, E-ISSN 2045-2322, Vol. 12, no 1, article id 11960Article in journal (Refereed) Published
Abstract [en]

Understanding the immunological effects of chemotherapy is of great importance, especially now that we have entered an era where ever-increasing pre-clinical and clinical efforts are put into combining chemotherapy and immunotherapy to combat cancer. Single-cell RNA sequencing (scRNA-seq) has proved to be a powerful technique with a broad range of applications, studies evaluating drug effects in co-cultures of tumor and immune cells are however scarce. We treated a co-culture comprised of human colorectal cancer (CRC) cells and peripheral blood mononuclear cells (PBMCs) with the nucleoside analogue trifluridine (FTD) and used scRNA-seq to analyze posttreatment gene expression profiles in thousands of individual cancer and immune cells concurrently. ScRNA-seq recapitulated major mechanisms of action previously described for FTD and provided new insight into possible treatment-induced effects on T-cell mediated antitumor responses.

Place, publisher, year, edition, pages
Springer Nature Springer Nature, 2022. Vol. 12, no 1, article id 11960
National Category
Medical Genetics and Genomics
Identifiers
URN: urn:nbn:se:uu:diva-481692DOI: 10.1038/s41598-022-16077-7ISI: 000824883400056PubMedID: 35831404OAI: oai:DiVA.org:uu-481692DiVA, id: diva2:1687765
Available from: 2022-08-16 Created: 2022-08-16 Last updated: 2025-02-10Bibliographically approved
In thesis
1. Preclinical tumor-immune modeling: For the identification of immunomodulatory drugs
Open this publication in new window or tab >>Preclinical tumor-immune modeling: For the identification of immunomodulatory drugs
2023 (English)Doctoral thesis, comprehensive summary (Other academic)
Abstract [en]

For a long time, the field of cancer research was dominated by a tumor cell-centric view. That, however, changed once it became recognized that medical cancer treatment is largely influenced by the combined effect exerted on both cancer and immune cells. In this work, we aimed to develop and apply preclinical model systems for the identification and evaluation of immunomodulatory anti-cancer agents. In Paper I, we employed single-cell RNA sequencing (scRNA-seq) to investigate immunological effects of trifluridine (FTD), a nucleoside analogue used for the treatment of colorectal cancer (CRC). The study revealed that while FTD induces immunogenic cell death (ICD), it may also attenuate T cell-mediated antitumor responses. In paper II and III, we developed and applied a phenotypic screening platform based on a miniaturized tumor-immune model. In paper II, aiming to identify immunological effects of clinical relevance and provide a reference point for screening novel compound libraries, the model system was used to assess a broad panel of standard anticancer agents. In paper III, the platform was used to screen a drug library containing 1280 small molecule drugs, all approved by the FDA or other agencies. Using this approach, statins were identified as enhancers of immune cell-mediated cancer cell killing. Finally, in paper IV, we developed the immuno-oncology hollow fiber assay (HFA) with the goal of bridging the gap between cell based in vitro assays and more complex mouse models for evaluation of immuno-oncological agents. The HFA is an in vivo assay in which semipermeable fibers are filled with cancer cells and implanted in rodents. We further developed the HFA to incorporate both cancer and immune cells. This novel assay demonstrated the potential to capture immune-mediated cancer cell killing in vivo within a matter of days. Collectively, this work provides a research approach for immuno-oncology drug screening, in vitro validation, and initial in vivo evaluation. 

Place, publisher, year, edition, pages
Uppsala: Acta Universitatis Upsaliensis, 2023. p. 54
Series
Digital Comprehensive Summaries of Uppsala Dissertations from the Faculty of Medicine, ISSN 1651-6206 ; 1979
Keywords
Immuno-oncology, anti-cancer drugs, preclinical modeling, drug screening, repurposing
National Category
Cancer and Oncology
Identifiers
urn:nbn:se:uu:diva-513004 (URN)978-91-513-1911-7 (ISBN)
Public defence
2023-11-24, H:Son Holmdahl, Akademiska Sjukhuset, Dag Hammarskjölds väg 8, Uppsala, 13:15 (English)
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Available from: 2023-10-31 Created: 2023-10-02 Last updated: 2023-10-31

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fulltext(3452 kB)431 downloads
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Selvin, ToveJarvius, MalinFryknäs, MårtenLarsson, RolfAndersson, Claes

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