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Targeting pathological alpha-synuclein: Protein engineering towards improved antibody-based therapeutics and their delivery to the brain
Uppsala University, Disciplinary Domain of Medicine and Pharmacy, Faculty of Pharmacy, Department of Pharmacy. (Protein drug design)ORCID iD: 0009-0007-6465-0773
2024 (English)Doctoral thesis, comprehensive summary (Other academic)
Description
Abstract [en]

The aggregation of alpha-synuclein (αSyn) into oligomers and fibrils is central to the disease progression of Parkinson’s disease and related pathologies, where αSyn aggregates spread between neurons and cause neurodegeneration. To this date, there is no treatment available that could interfere with the aggregation of αSyn to potentially stop the disease progression. Among the major limitations in the development of therapeutics against αSyn aggregation are the low extracellular concentration of αSyn, the low selectivity of therapeutics for the pathologically relevant αSyn species, and the lacking detailed knowledge about the actual pathological αSyn species.

In this thesis, different engineered antibodies and αSyn mutants were investigated with the aim to identify better strategies of antibody-based treatment of αSyn aggregation.

In Paper I, we engineered multivalent antibodies based on the αSyn aggregate-specific antibody SynO2 to enhance the antibody’s binding strength to a wide range of soluble αSyn aggregates. We could show that the higher valency increased the binding strength to αSyn aggregates up to 20-fold.

In Paper II, we aimed to improve the design of the antibody RmAb158-scFv8D3 to enhance its TfR-mediated brain uptake. By drastically reducing the linker length between the therapeutic antibody and its TfR-targeting scFv8D3, we showed a two-fold enhanced transcytosis across an in vitro BBB model.

In Paper III, we fused a negatively charged peptide to the αSyn aggregate-specific antibodies SynO2 and 9E4 to test whether those fusion antibodies had the potential to bind with higher avidity to αSyn aggregates. Our results showed lower binding strengths compared with the parental antibodies.

In Paper IV, we designed αSyn mutants with a stabilized beta-hairpin conformation to produce stable, small αSyn oligomers closely resembling native, pathological αSyn oligomers. We showed that two of the mutants formed exclusively pentameric and hexameric oligomers under conditions that promoted fibrillation of wild-type αSyn.

In conclusion, this thesis shows that increasing the valency of an antibody is a possible strategy to enhance its binding strength to αSyn aggregates. However, to effectively target pathologically relevant αSyn species, a more selective targeting approach may be required, possibly through a conformational epitope exclusive to αSyn oligomers.

Place, publisher, year, edition, pages
Uppsala: Acta Universitatis Upsaliensis, 2024. , p. 54
Series
Digital Comprehensive Summaries of Uppsala Dissertations from the Faculty of Pharmacy, ISSN 1651-6192 ; 358
Keywords [en]
Parkinson’s disease (PD), alpha-synuclein (αSyn), beta-hairpin, protein drugs, multivalent antibodies, blood-brain barrier (BBB), transferrin receptor (TfR)
National Category
Biochemistry and Molecular Biology Medical Biotechnology (with a focus on Cell Biology (including Stem Cell Biology), Molecular Biology, Microbiology, Biochemistry or Biopharmacy)
Identifiers
URN: urn:nbn:se:uu:diva-536149ISBN: 978-91-513-2198-1 (print)OAI: oai:DiVA.org:uu-536149DiVA, id: diva2:1889167
Public defence
2024-10-04, A1:107a, BMC, Husargatan 3, Uppsala, 09:15 (English)
Opponent
Supervisors
Available from: 2024-09-12 Created: 2024-08-14 Last updated: 2024-09-12
List of papers
1. Multivalent design of the monoclonal SynO2 antibody improves binding strength to soluble α-Synuclein aggregates
Open this publication in new window or tab >>Multivalent design of the monoclonal SynO2 antibody improves binding strength to soluble α-Synuclein aggregates
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2023 (English)In: mAbs, ISSN 1942-0862, E-ISSN 1942-0870, Vol. 15, no 1, article id 2256668Article in journal (Refereed) Published
Abstract [en]

Soluble aggregates are reported to be the most neurotoxic species of alpha-Synuclein (alpha Syn) in Parkinson's disease (PD) and hence are a promising target for diagnosis and treatment of PD. However, the predominantly intracellular location of alpha Syn limits its accessibility, especially for antibody-based molecules and prompts the need for exceptionally strong soluble alpha Syn aggregate binders to enhance their sensitivity and efficacy for targeting the extracellular alpha Syn pool. In this study, we have created the multivalent antibodies TetraSynO2 and HexaSynO2, derived from the alpha Syn oligomer-specific antibody SynO2, to increase avidity binding to soluble alpha Syn aggregate species through more binding sites in close proximity. The multivalency was achieved through recombinant fusion of single-chain variable fragments of SynO2 to the antibodies' original N-termini. Our ELISA results indicated a 20-fold increased binding strength of the multivalent formats to alpha Syn aggregates, while binding to alpha Syn monomers and unspecific binding to amyloid beta protofibrils remained low. Kinetic analysis using LigandTracer revealed that only 80% of SynO2 bound bivalently to soluble aSyn aggregates, whereas the proportion of TetraSynO2 and HexaSynO2 binding bi- or multivalently to soluble alpha Syn aggregates was increased to similar to 95% and 100%, respectively. The overall improved binding strength of TetraSynO2 and HexaSynO2 implies great potential for immunotherapeutic and diagnostic applications with targets of limited accessibility, like extra-cellular alpha Syn aggregates. The ability of the multivalent antibodies to bind a wider range of alpha Syn aggregate species, which are not targetable by conventional bivalent antibodies, thus could allow for an earlier and more effective intervention in the progression of PD.

Place, publisher, year, edition, pages
Taylor & Francis, 2023
Keywords
Avidity, multivalent antibodies, Parkinson's disease (PD), soluble aggregates, alpha-Synuclein (alpha syn)
National Category
Neurosciences
Identifiers
urn:nbn:se:uu:diva-514745 (URN)10.1080/19420862.2023.2256668 (DOI)001070285200001 ()37737124 (PubMedID)
Funder
ParkinsonfondenSwedish Research CouncilÅhlén-stiftelsenMagnus Bergvall FoundationVinnovaAlzheimerfondenOlle Engkvists stiftelseBertil and Ebon Norlin Foundation for Medical ResearchIngegerd Berghs stiftelseGunvor och Josef Anérs stiftelseO.E. och Edla Johanssons vetenskapliga stiftelseTorsten Söderbergs stiftelse
Available from: 2023-10-31 Created: 2023-10-31 Last updated: 2024-08-14Bibliographically approved
2. A shorter linker in the bispecific antibody RmAb158-scFv8D3 improves TfR-mediated Blood-Brain Barrier transcytosis in vitro
Open this publication in new window or tab >>A shorter linker in the bispecific antibody RmAb158-scFv8D3 improves TfR-mediated Blood-Brain Barrier transcytosis in vitro
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(English)In: Scientific Reports, E-ISSN 2045-2322Article in journal (Other academic) Submitted
Abstract [en]

 Transferrin Receptor (TfR)-mediated transcytosis across the blood-brain barrier (BBB) enables the uptake of bispecific therapeutic antibodies into the brain. At therapeutically relevant concentrations, bivalent binding to TfR appears to reduce the transcytosis efficiency by receptor crosslinking. In this study, we aimed to improve BBB transcytosis of symmetric antibodies through minimizing their ability to cause TfR crosslinking. We created variants of the previously published RmAb158-scFv8D3, where the linker length between RmAb158 and the mTfR-targeting scFv8D3 was adjusted. We investigated the effect of the linker length on the antibodies’ binding kinetics to mTfR using ELISA and LigandTracer assays, and their ability to transcytose across BBB endothelial cells (In-Cell BBB-Trans assay). We show that even a direct fusion without a linker does not alter the antibodies’ apparent affinities to mTfR indicating their valency is unlikely affected by the linker length. However, the shortest linker variants demonstrated BBB transcytosis levels comparable to that of the monovalent control at a high antibody concentration and showed an almost two-fold higher level of BBB transcytosis compared to the longer linker variants at the high concentration. Our new RmAb158-scFv8D3 short-linker variants are examples of symmetric, therapeutic antibodies with improved TfR-binding characteristics to facilitate more efficient brain uptake. We hypothesize that bivalent binding to TfR as such does not negatively affect BBB transcytosis in vitro, but a very short distance between TfR-targeting domains lowers the probability of receptor crosslinking. This study provides valuable insights into antibody-TfR interaction kinetics, contributing to future development of TfR-targeting antibody-based treatments for brain diseases.

Keywords
Blood-brain-barrier (BBB) shuttle; Transferrin receptor (TfR); RmAb158-scFv8D3; receptor crosslinking; bispecific antibodies; monovalent and bivalent binding
National Category
Medical Biotechnology (with a focus on Cell Biology (including Stem Cell Biology), Molecular Biology, Microbiology, Biochemistry or Biopharmacy) Biochemistry and Molecular Biology Neurosciences
Identifiers
urn:nbn:se:uu:diva-536144 (URN)
Funder
ParkinsonfondenSwedish Research CouncilÅhlén-stiftelsenHarald Jeanssons stiftelseMagnus Bergvall FoundationVinnovaAlzheimerfondenOlle Engkvists stiftelseBertil and Ebon Norlin Foundation for Medical ResearchIngegerd Berghs stiftelseGunvor och Josef Anérs stiftelseO.E. och Edla Johanssons vetenskapliga stiftelseTorsten Söderbergs stiftelseInsamlingsfonden Bissen BrainwalkThe Swedish Brain Foundation
Available from: 2024-08-13 Created: 2024-08-13 Last updated: 2024-08-14
3. A charged tail on anti-α-Synuclein antibodies does not enhance their affinity to α-Synuclein fibrils
Open this publication in new window or tab >>A charged tail on anti-α-Synuclein antibodies does not enhance their affinity to α-Synuclein fibrils
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2024 (English)In: PLOS ONE, E-ISSN 1932-6203, Vol. 19, no 8, article id e0308521Article in journal (Refereed) Published
Abstract [en]

The aggregation of α-Synuclein (αSyn) is strongly linked to neuronal death in Parkinson’s disease and other synucleinopathies. The spreading of aggregated αSyn between neurons is at least partly dependent on electrostatic interactions between positively charged stretches on αSyn fibrils and the negatively charged heparan sulphate proteoglycans on the cell surface. To date there is still no therapeutic option available that could halt the progression of Parkinson’s disease and one of the major limitations is likely the relatively low proportion of αSyn aggregates accessible to drugs in the extracellular space. Here, we investigated whether a negatively charged peptide tail fused to the αSyn aggregate-specific antibodies SynO2 and 9E4 could enhance the antibodies’ avidity to αSyn aggregates in order to improve their potential therapeutic effect through inhibiting cell-to-cell spreading and enhancing the clearance of extracellular aggregates. We performed ELISAs to test the avidity to αSyn aggregates of both monovalent and bivalent antibody formats with and without the peptide tail. Our results show that the addition of the negatively charged peptide tail decreased the binding strength of both antibodies to αSyn aggregates at physiological salt conditions, which can likely be explained by intermolecular repulsions between the tail and the negatively charged C-terminus of αSyn. Additionally, the tail might interact with the paratopes of the SynO2 antibody abolishing its binding to αSyn aggregates. Conclusively, our peptide tail did not fulfil the required characteristics to improve the antibodies’ binding to αSyn aggregates. Fine-tuning the design of the peptide tail to avoid its interaction with the antibodies’ CDR and to better mimic relevant characteristics of heparan sulphates for αSyn aggregate binding may help overcome the limitations observed in this study.

Place, publisher, year, edition, pages
Public Library of Science (PLoS), 2024
Keywords
SynO2, 9E4, avidity, alpha-synuclein (αSyn), fibrils, cell-to-cell propagation, synucleinopathies, Parkinson’s disease (PD)
National Category
Medical Biotechnology (with a focus on Cell Biology (including Stem Cell Biology), Molecular Biology, Microbiology, Biochemistry or Biopharmacy) Biochemistry and Molecular Biology
Identifiers
urn:nbn:se:uu:diva-536145 (URN)10.1371/journal.pone.0308521 (DOI)001304208400021 ()39208301 (PubMedID)
Funder
ParkinsonfondenSwedish Research CouncilÅhlén-stiftelsenHarald Jeanssons stiftelseMagnus Bergvall FoundationVinnovaAlzheimerfondenOlle Engkvists stiftelseBertil and Ebon Norlin Foundation for Medical ResearchIngegerd Berghs stiftelseGunvor och Josef Anérs stiftelseO.E. och Edla Johanssons vetenskapliga stiftelseTorsten Söderbergs stiftelseInsamlingsfonden Bissen BrainwalkThe Swedish Brain FoundationKnut and Alice Wallenberg Foundation
Available from: 2024-08-13 Created: 2024-08-13 Last updated: 2024-09-30Bibliographically approved
4. A stable β-hairpin conformation stabilizes alpha-synuclein as small oligomers
Open this publication in new window or tab >>A stable β-hairpin conformation stabilizes alpha-synuclein as small oligomers
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(English)Manuscript (preprint) (Other academic)
Keywords
alpha-Synuclein (αSyn), beta-hairpin, small stable oligomers, oligomerization, fibrillation, aggregation inhibition, point mutations
National Category
Medical Biotechnology (with a focus on Cell Biology (including Stem Cell Biology), Molecular Biology, Microbiology, Biochemistry or Biopharmacy) Biochemistry and Molecular Biology Biophysics
Identifiers
urn:nbn:se:uu:diva-536146 (URN)
Available from: 2024-08-14 Created: 2024-08-14 Last updated: 2024-08-14

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