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Pulse-Echo Speed-of-Sound Reconstruction for Quantitative Ultrasound Imaging
Uppsala University, Disciplinary Domain of Science and Technology, Mathematics and Computer Science, Department of Information Technology, Division Vi3.ORCID iD: 0000-0003-1737-0756
2026 (English)Doctoral thesis, comprehensive summary (Other academic)
Description
Abstract [en]

Speed of sound (SoS) is the longitudinal propagation speed of ultrasound waves in a medium, and it plays a central role in ultrasound imaging in several ways: Beamforming, which is the conversion of received time-domain echo signals into spatially resolved images, requires an assumed SoS. An inaccurate beamforming SoS leads to aberration artifacts, degrading the quality of conventional brightness-mode (B-mode) images and impairing other ultrasound modalities that rely on accurately beamformed data. SoS is also an emerging quantitative ultrasound biomarker that can inform about tissue composition and pathological state.

This thesis focuses on pulse-echo SoS estimation using conventional handheld ultrasound transducers. In particular, the thesis investigates displacement-based SoS estimation, where apparent shifts between images acquired with different transmit sequences are used to infer the underlying SoS. While displacement-based approaches are promising, their performance depends on several factors, including the accuracy of utilized imaging model, the choice of regularization, the quality of measurements, and the robustness of the reconstruction method.

This thesis addresses several of these challenges, developing accurate and robust pulse-echo SoS estimation methods and evaluating their utility in clinically relevant applications. The key methodological contributions include: an analytical global (single-value) SoS estimator based on transmission geometry; its extension to windowed SoS estimation in a region of interest; formulating plane-wave SoS imaging as a convolution problem for effectively learning an improved imaging model from data; and a model-based deep learning framework that combines plug-and-play reconstruction with a measurement-refinement module that simultaneously denoises measurements, inpaints missing ones, and compensates for simplifications in assumed imaging models. The proposed methods are successfully evaluated in breast ultrasound applications through breast density classification with our global SoS estimation and through breast lesion characterization with local SoS imaging. Overall, this thesis contributes to the development of robust pulse-echo SoS imaging methods and supports the continued translation of SoS toward a practical quantitative biomarker in clinical ultrasound.  

Place, publisher, year, edition, pages
Uppsala: Acta Universitatis Upsaliensis, 2026. , p. 79
Series
Digital Comprehensive Summaries of Uppsala Dissertations from the Faculty of Science and Technology, ISSN 1651-6214 ; 2694
Keywords [en]
Beamforming, Inverse problems, Image reconstruction, Model-based deep learning, Breast density, Breast cancer
National Category
Medical Imaging Radiology and Medical Imaging Signal Processing Cancer and Oncology Computer Vision and Learning Systems Computer graphics and computer vision
Research subject
Computerized Image Processing
Identifiers
URN: urn:nbn:se:uu:diva-588526ISBN: 978-91-513-2891-1 (print)OAI: oai:DiVA.org:uu-588526DiVA, id: diva2:2076226
Public defence
2026-09-04, Room 2001, Ångströmlaboratoriet, Regementsvägen 10, Uppsala, 09:15 (English)
Opponent
Supervisors
Available from: 2026-08-17 Created: 2026-06-21 Last updated: 2026-08-17
List of papers
1. Analytical Estimation of Beamforming Speed-of-Sound Using Transmission Geometry
Open this publication in new window or tab >>Analytical Estimation of Beamforming Speed-of-Sound Using Transmission Geometry
2023 (English)In: Ultrasonics, ISSN 0041-624X, E-ISSN 1874-9968, Vol. 134, article id 107069Article in journal (Refereed) Published
Abstract [en]

Most ultrasound imaging techniques necessitate the fundamental step of converting temporal signals received from transducer elements into a spatial echogenecity map. This beamforming (BF) step requires the knowledge of speed-of-sound (SoS) value in the imaged medium. An incorrect assumption of BF SoS leads to aberration artifacts, not only deteriorating the quality and resolution of conventional brightness mode (B-mode) images, hence limiting their clinical usability, but also impairing other ultrasound modalities such as elastography and spatial SoS reconstructions, which rely on faithfully beamformed images as their input. In this work, we propose an analytical method for estimating BF SoS. We show that pixel-wise relative shifts between frames beamformed with an assumed SoS is a function of geometric disparities of the transmission paths and the error in such SoS assumption. Using this relation, we devise an analytical model, the closed form solution of which yields the difference between the assumed and the true SoS in the medium. Based on this, we correct the BF SoS, which can also be applied iteratively. Both in simulations and experiments, lateral B-mode resolution is shown to be improved by ≈ 25% compared to that with an initial SoS assumption error of 3.3% (50 m/s), while localization artifacts from beamforming are also corrected. After 5 iterations, our method achieves BF SoS errors of under 0.6 m/s in simulations. Residual time-delay errors in beamforming 32 numerical phantoms are shown to reduce down to 0.07 µs, with average improvements of up to 21 folds compared to initial inaccurate assumptions. We additionally show the utility of the proposed method in imaging local SoS maps, where using our correction method reduces reconstruction root-mean-square errors substantially, down to their lower-bound with actual BF SoS.

Place, publisher, year, edition, pages
Elsevier, 2023
Keywords
Beamforming, Aberration correction, USCT
National Category
Medical Imaging
Identifiers
urn:nbn:se:uu:diva-490924 (URN)10.1016/j.ultras.2023.107069 (DOI)001028942900001 ()37331051 (PubMedID)
Funder
Uppsala University
Available from: 2022-12-15 Created: 2022-12-15 Last updated: 2026-06-21Bibliographically approved
2. Breast Density Assessment via Quantitative Sound-Speed Measurement Using Conventional Ultrasound Transducers
Open this publication in new window or tab >>Breast Density Assessment via Quantitative Sound-Speed Measurement Using Conventional Ultrasound Transducers
Show others...
2025 (English)In: European Radiology, ISSN 0938-7994, E-ISSN 1432-1084, Vol. 35, no 3, p. 1490-1501Article in journal (Refereed) Published
Abstract [en]

Objectives: The aim is to assess the feasibility and accuracy of a novel quantitative ultrasound (US) method based on global speed-of-sound (g-SoS) measurement using conventional US machines, for breast density assessment in comparison to mammographic ACR (m-ACR) categories.

Materials and methods: In a prospective study, g-SoS was assessed in the upper-outer breast quadrant of 100 women, with 92 of them also having m-ACR assessed by two radiologists across the entire breast. For g-SoS, ultrasonic waves were transmitted from varying transducer locations and the image misalignments between these were then related analytically to breast SoS. To test reproducibility, two consecutive g-SoS acquisitions each were taken at two similar breast locations by the same operator.

Results: Measurements were found highly repeatable, with a mean absolute difference +/- standard deviation of 3.16 +/- 3.79 m/s. Multiple measurements were combined yielding a single g-SoS estimate per each patient, which strongly correlated to m-ACR categories (Spearman's = 0.773). The g-SoS values for categories A-D were 1459.6 +/- 0.74, 1475.6 +/- 15.92, 1515.6 +/- 27.10, and 1545.7 +/- 20.62, with all groups (except A-B) being significantly different from each other. Dense breasts (m-ACR C&D) were classified with 100% specificity at 78% sensitivity, with an area under the curve (AUC) of 0.931. Extremely dense breasts (m-ACR D) were classified with 100% sensitivity at 77.5% specificity (AUC = 0.906).

Conclusion: Quantitative g-SoS measurement of the breast was shown feasible and repeatable using conventional US machines, with values correlating strongly with m-ACR assessments.

Key Points: Breast density is a strong predictor of risk for breast cancer, which frequently develops in dense tissue regions. Therefore, density assessment calls for refined non-ionizing methods.

Findings: Quantitative global speed-of-sound (g-SoS) measurement of the breast is shown to be feasible using conventional US machines, repeatable, and able to classify breast density with high accuracy.

Clinical relevance: Being effective in classifying dense breasts, where mammography has reduced sensitivity, g-SoS can help stratify patients for alternative modalities. Ideal day for mammography or MRI can be determined by monitoring g-SoS. Furthermore, g-SoS can be integrated into personalized risk assessment.

Place, publisher, year, edition, pages
Springer, 2025
Keywords
Ultrasonography, Breast density, Breast neoplasm, Mammography
National Category
Radiology and Medical Imaging Cancer and Oncology Medical Imaging
Identifiers
urn:nbn:se:uu:diva-552040 (URN)10.1007/s00330-024-11335-w (DOI)001425217600014 ()39798006 (PubMedID)2-s2.0-85217208028 (Scopus ID)
Note

Can Deniz Bezek and Monika Farkas contributed equally to this work.

Available from: 2025-03-11 Created: 2025-03-11 Last updated: 2026-07-28Bibliographically approved
3. Windowed Sound-Speed Prediction by Extending Beamforming-Based Global Estimators
Open this publication in new window or tab >>Windowed Sound-Speed Prediction by Extending Beamforming-Based Global Estimators
2025 (English)In: 2025 IEEE International Ultrasonics Symposium (IUS), Institute of Electrical and Electronics Engineers (IEEE), 2025, p. 1-4Conference paper, Published paper (Other academic)
Abstract [en]

Speed of sound (SoS) is an emerging quantitative biomechanical marker for tissue characterization. It is also used for beamforming in various ultrasound imaging solutions, the success of which hence depend critically on the accuracy of SoS assumption. Several robust global (single-value) SoS estimation techniques have been proposed. However, in heterogeneous in-vivo tissue, localized SoS estimation is desired. In this work, we propose a meta-method that extends beamforming-based global SoS estimation approaches to enable windowed SoS estimation within a desired region of interest (ROI) that is SoS-wise homogeneous. By dividing the ROI into sub-windows, we introduce a differential formulation that eliminates the influence of superficial layers for deducing the SoS within the ROI. We demonstrate this based on a recent beamforming-based SoS estimator using simulations and phantom experiments, showing that our method can accurately estimate ROI-window SoS under varying superficial layer conditions. Our window-based correction method reduces the SoS errors by over 80% in numerical simulations and over 60% in phantom experiments compared to applying global SoS estimation naively within the ROI. Our window-correction meta-method can extend to other beamforming-based global SoS estimators that are robust enough within sub-windows of a ROI.

Place, publisher, year, edition, pages
Institute of Electrical and Electronics Engineers (IEEE), 2025
Series
IEEE International Ultrasonics Symposium, ISSN 1948-5719, E-ISSN 1948-5727
National Category
Radiology and Medical Imaging
Identifiers
urn:nbn:se:uu:diva-574185 (URN)10.1109/IUS62464.2025.11201750 (DOI)001719884800482 ()2-s2.0-105021805903 (Scopus ID)979-8-3315-2332-9 (ISBN)979-8-3315-2333-6 (ISBN)
Conference
2025 IEEE International Ultrasonics Symposium (IUS) 15-18 Sept. 2025, Utrecht, Netherlands
Available from: 2025-12-23 Created: 2025-12-23 Last updated: 2026-06-21Bibliographically approved
4. Learning the Imaging Model of Speed-of-Sound Reconstruction via a Convolutional Formulation
Open this publication in new window or tab >>Learning the Imaging Model of Speed-of-Sound Reconstruction via a Convolutional Formulation
2025 (English)In: IEEE Transactions on Medical Imaging, ISSN 0278-0062, E-ISSN 1558-254X, Vol. 44, no 9, p. 3600-3609Article in journal (Refereed) Published
Abstract [en]

Speed-of-sound (SoS) is an emerging ultrasound contrast modality, where pulse-echo techniques using conventional transducers offer multiple benefits. For estimating tissue SoS distributions, spatial domain reconstruction from relative speckle shifts between different beamforming sequences is a promising approach. This operates based on a forward model that relates the sought local values of SoS to observed speckle shifts, for which the associated image reconstruction inverse problem is solved. The reconstruction accuracy thus highly depends on the hand-crafted forward imaging model. In this work, we propose to learn the SoS imaging model based on data. We introduce a convolutional formulation of the pulse-echo SoS imaging problem such that the entire field-of-view requires a single unified kernel, the learning of which is then tractable and robust. We present least-squares estimation of such convolutional kernel, which can further be constrained and regularized for numerical stability. In experiments, we show that a forward model learned from k-Wave simulations reduces the contrast error of SoS reconstruc- tions by 38%, compared to a conventional hand-crafted line-based wave-path model. This simulation-learned model generalizes successfully to acquired phantom data, reducing the contrast error compared to the conventional hand-crafted alternative. We successfully demonstrate the feasibility of learning machine-specific kernels as well as one-shot learning from a single image. On in-vivo data of a cancerous breast tumor, the phantom-learned model exhibits an SoS contrast of 34.6 m/s, as an impressive improvement over the conventional model contrast of merely 3.4 m/s.

Place, publisher, year, edition, pages
Institute of Electrical and Electronics Engineers (IEEE), 2025
National Category
Medical Imaging
Identifiers
urn:nbn:se:uu:diva-545341 (URN)10.1109/tmi.2024.3480690 (DOI)001575893400011 ()2-s2.0-105016396715 (Scopus ID)
Available from: 2024-12-16 Created: 2024-12-16 Last updated: 2026-06-21Bibliographically approved
5. DenOiS: Dual-Domain Denoising of Observation and Solution in Ultrasound Image Reconstruction
Open this publication in new window or tab >>DenOiS: Dual-Domain Denoising of Observation and Solution in Ultrasound Image Reconstruction
(English)Manuscript (preprint) (Other academic)
Abstract [en]

Medical imaging aims to recover underlying tissue properties, using inexact (simplified/linearized) imaging models and often from inaccurate and incomplete measurements. Analytical reconstruction methods rely on hand-crafted regularization, sensitive to noise assumptions and parameter tuning. Among deep learning alternatives, plug-and-play (PnP) approaches learn regularization while incorporating imaging physics during inference, outperforming purely data-driven methods. The performance of all these approaches, however, still strongly depends on measurement quality and imaging model accuracy. In this work, we propose DenOiS, a framework that denoises both input observations and resulting solution in their respective domains. It consists of an observation refinement strategy that corrects degraded measurements while compensating for imaging model simplifications, and a diffusion-based PnP reconstruction approach that remains robust under missing measurements. DenOiS enables generalization to real data from training only in simulations, resulting in high-fidelity image reconstruction with noisy observations and inexact imaging models. We demonstrate this for speed-of-sound imaging as a challenging setting of quantitative ultrasound image reconstruction.

National Category
Medical Imaging
Identifiers
urn:nbn:se:uu:diva-588525 (URN)10.48550/arXiv.2604.02105 (DOI)
Available from: 2026-06-05 Created: 2026-06-05 Last updated: 2026-06-21
6. Pulse-Echo Ultrasound Methods for Speed-of-Sound Estimation: A Review
Open this publication in new window or tab >>Pulse-Echo Ultrasound Methods for Speed-of-Sound Estimation: A Review
(English)Manuscript (preprint) (Other academic)
National Category
Medical Imaging
Research subject
Computerized Image Processing
Identifiers
urn:nbn:se:uu:diva-591106 (URN)
Available from: 2026-06-18 Created: 2026-06-18 Last updated: 2026-07-28

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